../../tmp/servers/virsirnadb/1704818902
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1769 | 1 | gtaaccgaaatcggttgaacc | 21 | |
| NC_001526.2 | Human papillomavirus type 16, complete genome | 32 | ..................... | 52 | 100 |
| NC_001526.2 | Human papillomavirus type 16, complete genome | 7465 | .c.......t.........g. | 7445 | 85 |
| NC_001526.2 | Human papillomavirus type 16, complete genome | 7870 | __.c..a........._____ | 7857 | 57 |
| NC_001357.1 | Human papillomavirus - 18, complete genome | 7472 | .c...............c.._ | 7453 | 85 |
| NC_001357.1 | Human papillomavirus - 18, complete genome | 39 | ..........a....c.____ | 55 | 71 |
| NC_001357.1 | Human papillomavirus - 18, complete genome | 7819 | .c.........a.....____ | 7835 | 71 |
| NC_001678.1 | Rhesus monkey papillomavirus, complete genome | 34 | ..........a....gc.... | 54 | 85 |
| NC_001583.1 | Human papillomavirus type 26, complete genome | 27 | ..........a......c.a. | 47 | 85 |
| NC_001583.1 | Human papillomavirus type 26, complete genome | 7805 | ...........gt..._____ | 7820 | 66 |
| NC_001587.1 | Human papillomavirus type 34, complete genome | 29 | ..........a......c.a. | 49 | 85 |
| NC_004765.1 | Felis domesticus papillomavirus type 1, complete genome | 6337 | .g...............____ | 6321 | 76 |
| NC_001586.1 | Human papillomavirus type 32, complete genome | 7539 | .c...............____ | 7555 | 76 |
| NC_001586.1 | Human papillomavirus type 32, complete genome | 7911 | __.............______ | 7923 | 61 |
| NC_001586.1 | Human papillomavirus type 32, complete genome | 45 | _.........a....______ | 58 | 61 |
| NC_001838.1 | Common chimpanzee papillomavirus 1, complete genome | 62 | _.c.....tt........... | 43 | 80 |
| NC_001838.1 | Common chimpanzee papillomavirus 1, complete genome | 7844 | __.....gt..........t. | 7862 | 76 |
| NC_001838.1 | Common chimpanzee papillomavirus 1, complete genome | 48 | __.............______ | 60 | 61 |
| NC_001593.1 | Human papillomavirus type 53, complete genome | 33 | ...........a....t.___ | 50 | 76 |
| NC_001593.1 | Human papillomavirus type 53, complete genome | 3617 | ___..........________ | 3626 | 47 |
| NC_001676.1 | Human papillomavirus 54, complete genome | 7730 | .c.............._____ | 7715 | 71 |
| NC_001676.1 | Human papillomavirus 54, complete genome | 61 | ___....gtt........... | 44 | 71 |
| NC_001676.1 | Human papillomavirus 54, complete genome | 7379 | _.........c..t.._____ | 7393 | 61 |
| NC_001595.1 | Human papillomavirus type 7, complete genome | 31 | ..........a....ccg... | 51 | 80 |
| NC_001355.1 | Human papillomavirus type 6b, complete genome | 62 | __.....ttt........... | 44 | 76 |
| NC_001355.1 | Human papillomavirus type 6b, complete genome | 7874 | _.........c....c.c.__ | 7857 | 71 |
| NC_014953.1 | Human papillomavirus type 129, complete genome | 7213 | .c......tg.........__ | 7195 | 76 |
| NC_014469.1 | Gammapapillomavirus HPV127, complete genome | 7123 | __..t............____ | 7109 | 66 |
| NC_014955.1 | Human papillomavirus type 132, complete genome | 6921 | ..........a....______ | 6907 | 66 |
| NC_001619.1 | Canine oral papillomavirus, complete genome | 70 | ___............______ | 59 | 57 |
| NC_008298.1 | Rousettus aegyptiacus papillomavirus type 1, complete genome | 7932 | ___............______ | 7921 | 57 |
| NC_004104.1 | Human papillomavirus type 90, complete genome | 7577 | ___............______ | 7566 | 57 |
| NC_004104.1 | Human papillomavirus type 90, complete genome | 7981 | __.........g...______ | 7993 | 57 |
| NC_001576.1 | Human papillomavirus type 10, complete genome | 7564 | ___............______ | 7553 | 57 |
| NC_008184.1 | Tursiops truncatus papillomavirus 2, complete genome | 7813 | ___............______ | 7824 | 57 |
| NC_010329.1 | Human papillomavirus type 88, complete genome | 3195 | _____..........._____ | 3185 | 52 |
| NC_012485.1 | Human papillomavirus type 109, complete genome | 3251 | __...........________ | 3261 | 52 |
| NC_014143.1 | Bettongia penicillata papillomavirus 1, complete genome | 1110 | _..........gt.gg...__ | 1127 | 66 |
| NC_002232.1 | Rabbit oral papillomavirus, complete genome | 6974 | _________.c.......... | 6985 | 52 |
| NC_007150.1 | Procyon lotor papillomavirus 1, complete genome | 8011 | ___..........c.______ | 8022 | 52 |
| NC_014952.1 | Human papillomavirus type 128, complete genome | 5332 | _________..........g. | 5321 | 52 |
| NC_013237.1 | Canine papillomavirus 6, complete genome | 8136 | ___...tt.tc........._ | 8120 | 61 |